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  "Package": "epiomics",
  "Title": "Analysis of Omics Data in Observational Studies",
  "Version": "1.2.0",
  "Authors@R": "person(\"Jesse\", \"Goodrich\", , \"jagoodri@usc.edu\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-6615-0472\"))",
  "Description": "A collection of fast and flexible functions for analyzing\nomics data in observational studies. Multiple different\napproaches for integrating multiple environmental/genetic\nfactors, omics data, and/or phenotype data are implemented.\nThis includes functions for performing omics wide association\nstudies with one or more variables of interest as the exposure\nor outcome; a function for performing a meet in the middle\nanalysis for linking exposures, omics, and outcomes (as\ndescribed by Chadeau-Hyam et al., (2010)\n<doi:10.3109/1354750X.2010.533285>); and a function for\nperforming a mixtures analysis across all omics features using\nquantile-based g-Computation (as described by Keil et al.,\n(2019) <doi:10.1289/EHP5838>).",
  "License": "GPL (>= 3)",
  "Config/testthat/edition": "3",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.2",
  "Config/pak/sysreqs": "cmake make libicu-dev",
  "Repository": "https://goodrich-lab.r-universe.dev",
  "Date/Publication": "2025-02-14 04:44:14 UTC",
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  "RemoteRef": "HEAD",
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  "Packaged": {
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    "User": "root"
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  "Author": "Jesse Goodrich [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-6615-0472>)",
  "Maintainer": "Jesse Goodrich <jagoodri@usc.edu>",
  "MD5sum": "7e8ecc020d215f0bafe90a98f3f760f6",
  "_user": "goodrich-lab",
  "_type": "src",
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  "_published": "2026-06-06T09:32:03.091Z",
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    "author": "Jesse Goodrich <jagoodri@usc.edu>",
    "committer": "Jesse Goodrich <jagoodri@usc.edu>",
    "message": "update dependencies\n",
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    "email": "jagoodri@usc.edu",
    "login": "jagoodrich",
    "orcid": "0000-0001-6615-0472",
    "description": "Assistant Professor at USC Department of Population and Public Health Sciences",
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      "role": "Imports"
    },
    {
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  "_tags": [],
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      "count": 76,
      "uuid": 32161948
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    "type": "organization",
    "name": "Goodrich Laboratory on Exposome And Precision Sciences at USC"
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    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/epiomics"
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    "extra/citation.html",
    "extra/citation.json",
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      "date": "2023-01-09"
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      "date": "2023-03-15"
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      "date": "2024-02-26"
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      "date": "2025-02-14"
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    "meet_in_middle",
    "owas",
    "owas_clogit",
    "owas_qgcomp",
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        "id2",
        "sex",
        "age",
        "weight",
        "case_control_set",
        "cc_status",
        "exposure1",
        "exposure2",
        "exposure3",
        "exposure4",
        "disease1",
        "disease2",
        "diseasecat1",
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        "feature_V2",
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      "table": true,
      "tojson": true
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      "page": "coef_plot_from_owas",
      "title": "Create volcano plot using results from owas",
      "topics": [
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      "title": "Example data with multiple exposures, multiple outcomes,",
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      "page": "owas",
      "title": "Perform 'omics wide association study",
      "topics": [
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      ]
    },
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      "title": "Perform 'omics wide association study for matched case control studies",
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      ]
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